Echinicola strongylocentroti strain MEBiC08714

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Cyclobacteriaceae

Genus

Echinicola

Description

Echinicola strongylocentroti strain MEBiC08714 is a Gram-negative, rod-shaped bacterium that exhibits heterotrophic metabolism and requires aerobic conditions for growth, with an optimal growth temperature of 25.0 °C. This strain is characterized by its capacity to utilize organic compounds as an energy source, which is typical for many members of the Echinicola genus. The Gram-negative cell wall structure of E. strongylocentroti suggests a potential for diverse interactions with its environment, including possible roles in nutrient cycling or symbiotic relationships. Its aerobic nature indicates a preference for oxygen-rich environments, which may limit its habitat to specific ecological niches where oxygen is readily available. The optimal growth temperature of 25.0 °C aligns with the typical thermal range for mesophilic organisms, indicating that this strain might thrive in moderate climates or environments that are not subject to extreme temperature fluctuations. Understanding the metabolic capabilities and growth conditions of Echinicola strongylocentroti strain MEBiC08714 could provide insights into its ecological role, particularly in marine or freshwater ecosystems where such heterotrophic bacteria contribute to the decomposition of organic matter. This could have implications for the broader microbial community dynamics and biogeochemical processes within its native habitats.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyCyclobacteriaceae
GenusEchinicola
SpeciesEchinicola strongylocentroti
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceheterotroph
PathogenicityNot Available

Genome Summary

Echinicola strongylocentroti strain MEBiC08714

Accession NumberNZ_CP030041.1

Gene Summary

Adenine Count

1744517 bp

Thymine Count

1747944 bp

Guanine Count

1384406 bp

Cytosine Count

1375277 bp

Genome Length

6252144 bp

Protein-coding Genes

4741 genes

Non-Coding Genes

79 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
pyridoxal phosphate-dependent aminotransferaseDN752_RS06710Not Available-1803829 - 180513649466.1
energy-dependent translational throttle protein ettaDN752_RS06715Not Available-1805267 - 180694662679.8
duf349 domain-containing proteinDN752_RS06720Not Available+1807088 - 180837150910.6
duf2795 domain-containing proteinDN752_RS06725Not Available+1808452 - 18086738742.81
lytr/algr family response regulator transcription factorDN752_RS06730Not Available-1808704 - 180944127881.9
sensor histidine kinaseDN752_RS06735Not Available-1809419 - 181047440464.0
liaf transmembrane domain-containing proteinDN752_RS06740Not Available-1810485 - 181128528841.4
2-c-methyl-d-erythritol 4-phosphate cytidylyltransferaseDN752_RS06745Not Available-1811433 - 181211625795.0
trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase queaDN752_RS06750Not Available-1812239 - 181328839918.8
abc transporter permeaseDN752_RS06755Not Available+1813417 - 181466445223.4

Displaying genes 1381 – 1390 of 4820 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites