Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola strongylocentroti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Echinicola strongylocentroti strain MEBiC08714
Accession NumberNZ_CP030041.1
Gene Summary
Adenine Count
1744517 bp
Thymine Count
1747944 bp
Guanine Count
1384406 bp
Cytosine Count
1375277 bp
Genome Length
6252144 bp
Protein-coding Genes
4741 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| helix-hairpin-helix domain-containing protein | DN752_RS06455 | Not Available | + | 1749933 - 1751639 | 64222.7 |
| hypothetical protein | DN752_RS06460 | Not Available | + | 1751648 - 1751935 | 10702.8 |
| cold-shock protein | DN752_RS06465 | Not Available | - | 1752003 - 1752194 | 6961.34 |
| sixa phosphatase family protein | DN752_RS06470 | Not Available | + | 1752281 - 1752772 | 18561.2 |
| sdr family nad(p)-dependent oxidoreductase | DN752_RS06475 | Not Available | - | 1752867 - 1753592 | 26397.7 |
| atp-dependent protease atpase subunit hslu | DN752_RS06480 | Not Available | - | 1753613 - 1755019 | 52574.1 |
| endopeptidase la | DN752_RS06485 | Not Available | - | 1755209 - 1757692 | 92996.4 |
| rip metalloprotease rsep | DN752_RS06490 | Not Available | - | 1758101 - 1759420 | 48669.1 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | DN752_RS06495 | Not Available | - | 1759424 - 1760590 | 43123.2 |
| s1c family serine protease | DN752_RS06500 | Not Available | + | 1760903 - 1762363 | 52740.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.