Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola strongylocentroti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Echinicola strongylocentroti strain MEBiC08714
Accession NumberNZ_CP030041.1
Gene Summary
Adenine Count
1744517 bp
Thymine Count
1747944 bp
Guanine Count
1384406 bp
Cytosine Count
1375277 bp
Genome Length
6252144 bp
Protein-coding Genes
4741 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| four helix bundle protein | DN752_RS06350 | Not Available | - | 1722162 - 1722521 | 13514.4 |
| translation elongation factor 4 | DN752_RS06355 | Not Available | - | 1722615 - 1724408 | 67240.5 |
| ragb/susd family nutrient uptake outer membrane protein | DN752_RS06360 | Not Available | - | 1724649 - 1726169 | 56877.3 |
| susc/raga family tonb-linked outer membrane protein | DN752_RS06365 | Not Available | - | 1726193 - 1729258 | 111560.0 |
| duf4924 family protein | DN752_RS06370 | Not Available | + | 1729757 - 1730287 | 20233.1 |
| hypothetical protein | DN752_RS06375 | Not Available | - | 1730310 - 1730642 | 13044.2 |
| tonb-dependent receptor | DN752_RS06380 | Not Available | - | 1731006 - 1732943 | 71981.5 |
| acp phosphodiesterase | DN752_RS06385 | Not Available | + | 1733017 - 1733622 | 23705.1 |
| hypothetical protein | DN752_RS06390 | Not Available | + | 1733609 - 1734058 | 17148.6 |
| m42 family metallopeptidase | DN752_RS06395 | Not Available | - | 1734256 - 1735308 | 38372.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.