Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola strongylocentroti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Echinicola strongylocentroti strain MEBiC08714
Accession NumberNZ_CP030041.1
Gene Summary
Adenine Count
1744517 bp
Thymine Count
1747944 bp
Guanine Count
1384406 bp
Cytosine Count
1375277 bp
Genome Length
6252144 bp
Protein-coding Genes
4741 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| trigger factor | DN752_RS06300 | Not Available | + | 1707050 - 1708378 | 50249.4 |
| atp-dependent clp protease proteolytic subunit | DN752_RS06305 | Not Available | + | 1708459 - 1709127 | 24722.7 |
| atp-dependent clp protease atp-binding subunit clpx | DN752_RS06310 | Not Available | + | 1709133 - 1710356 | 45559.1 |
| lipid-a-disaccharide synthase | DN752_RS06315 | Not Available | - | 1710422 - 1711537 | 42390.6 |
| 6-pyruvoyl trahydropterin synthase family protein | DN752_RS06320 | Not Available | - | 1711627 - 1712046 | 16024.3 |
| ragb/susd family nutrient uptake outer membrane protein | DN752_RS06325 | Not Available | - | 1712362 - 1713798 | 52771.1 |
| susc/raga family tonb-linked outer membrane protein | DN752_RS06330 | Not Available | - | 1713811 - 1716798 | 107519.0 |
| ompa family protein | DN752_RS06335 | Not Available | - | 1718518 - 1720428 | 71929.5 |
| 7-carboxy-7-deazaguanine synthase quee | DN752_RS06340 | Not Available | - | 1720434 - 1721060 | 23627.4 |
| bifunctional 5,10-methylenetetrahydrofolate dehydrogenase/5,10-methenyltetrahydrofolate cyclohydrolase | DN752_RS06345 | Not Available | - | 1721230 - 1722114 | 31718.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.