Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola strongylocentroti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Echinicola strongylocentroti strain MEBiC08714
Accession NumberNZ_CP030041.1
Gene Summary
Adenine Count
1744517 bp
Thymine Count
1747944 bp
Guanine Count
1384406 bp
Cytosine Count
1375277 bp
Genome Length
6252144 bp
Protein-coding Genes
4741 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sigma-54-dependent transcriptional regulator | DN752_RS06000 | Not Available | + | 1590134 - 1591486 | 51309.3 |
| response regulator | DN752_RS06005 | Not Available | + | 1591520 - 1592842 | 49438.6 |
| helix-turn-helix transcriptional regulator | DN752_RS06010 | Not Available | + | 1593616 - 1593966 | 13610.7 |
| rna polymerase sigma factor | DN752_RS06015 | Not Available | + | 1594502 - 1595089 | 23343.1 |
| hypothetical protein | DN752_RS24670 | Not Available | + | 1595089 - 1595265 | 6587.9 |
| mechanosensitive ion channel family protein | DN752_RS06020 | Not Available | + | 1595289 - 1596116 | 30812.9 |
| hypothetical protein | DN752_RS06025 | Not Available | - | 1596269 - 1596598 | 12518.2 |
| ompa family protein | DN752_RS06030 | Not Available | - | 1596762 - 1599443 | 101976.0 |
| type ix secretion system membrane protein porp/sprf | DN752_RS06035 | Not Available | - | 1599446 - 1600435 | 37187.1 |
| gliding motility-associated c-terminal domain-containing protein | DN752_RS06040 | Not Available | - | 1600816 - 1625421 | 856216.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.