Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola strongylocentroti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Echinicola strongylocentroti strain MEBiC08714
Accession NumberNZ_CP030041.1
Gene Summary
Adenine Count
1744517 bp
Thymine Count
1747944 bp
Guanine Count
1384406 bp
Cytosine Count
1375277 bp
Genome Length
6252144 bp
Protein-coding Genes
4741 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dinb family protein | DN752_RS05900 | Not Available | + | 1557379 - 1557912 | 20444.4 |
| nrde family protein | DN752_RS05905 | Not Available | + | 1558052 - 1558777 | 27224.3 |
| duf6695 family protein | DN752_RS05910 | Not Available | + | 1558744 - 1559742 | 36701.7 |
| hypothetical protein | DN752_RS05915 | Not Available | - | 1559876 - 1560739 | 31400.0 |
| hypothetical protein | DN752_RS05920 | Not Available | - | 1560771 - 1561280 | 18923.2 |
| ydcf family protein | DN752_RS05925 | Not Available | - | 1561786 - 1563033 | 46707.1 |
| ragb/susd family nutrient uptake outer membrane protein | DN752_RS05930 | Not Available | - | 1563286 - 1564953 | 62620.9 |
| susc/raga family tonb-linked outer membrane protein | DN752_RS05935 | Not Available | - | 1564965 - 1568384 | 126780.0 |
| fecr family protein | DN752_RS05940 | Not Available | - | 1568512 - 1569486 | 36329.1 |
| rna polymerase sigma factor | DN752_RS05945 | Not Available | - | 1569578 - 1570141 | 22414.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.