Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola strongylocentroti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Echinicola strongylocentroti strain MEBiC08714
Accession NumberNZ_CP030041.1
Gene Summary
Adenine Count
1744517 bp
Thymine Count
1747944 bp
Guanine Count
1384406 bp
Cytosine Count
1375277 bp
Genome Length
6252144 bp
Protein-coding Genes
4741 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 3'(2'),5'-bisphosphate nucleotidase cysq | DN752_RS05655 | Not Available | - | 1488289 - 1489074 | 29141.9 |
| mannose-1-phosphate guanylyltransferase | DN752_RS05660 | Not Available | - | 1489156 - 1490154 | 37273.5 |
| sdr family oxidoreductase | DN752_RS05665 | Not Available | - | 1490191 - 1491276 | 39239.5 |
| udp-glucose dehydrogenase family protein | DN752_RS05670 | Not Available | - | 1491316 - 1492632 | 48128.0 |
| sdr family nad(p)-dependent oxidoreductase | DN752_RS05675 | Not Available | - | 1492798 - 1493676 | 31210.2 |
| lipopolysaccharide biosynthesis protein | DN752_RS05680 | Not Available | - | 1493673 - 1495202 | 56762.3 |
| 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase | DN752_RS05685 | Not Available | - | 1495216 - 1496952 | 65335.4 |
| upxy family transcription antiterminator | DN752_RS05690 | Not Available | + | 1497939 - 1498442 | 19154.1 |
| hypothetical protein | DN752_RS05695 | Not Available | - | 1499678 - 1500049 | 13633.4 |
| penicillin acylase family protein | DN752_RS05700 | Not Available | - | 1500051 - 1502486 | 91697.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.