Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola strongylocentroti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Echinicola strongylocentroti strain MEBiC08714
Accession NumberNZ_CP030041.1
Gene Summary
Adenine Count
1744517 bp
Thymine Count
1747944 bp
Guanine Count
1384406 bp
Cytosine Count
1375277 bp
Genome Length
6252144 bp
Protein-coding Genes
4741 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 2 protein | DN752_RS05405 | Not Available | - | 1416251 - 1418020 | 67441.4 |
| glycoside hydrolase family protein | DN752_RS05410 | Not Available | - | 1418046 - 1419176 | 42164.2 |
| sulfatase | DN752_RS05415 | Not Available | - | 1419237 - 1420733 | 56684.6 |
| ragb/susd family nutrient uptake outer membrane protein | DN752_RS05420 | Not Available | - | 1420788 - 1422245 | 54418.9 |
| susc/raga family tonb-linked outer membrane protein | DN752_RS05425 | Not Available | - | 1422263 - 1425382 | 113231.0 |
| fad-dependent oxidoreductase | DN752_RS05430 | Not Available | - | 1425442 - 1427718 | 84465.2 |
| sodium:solute symporter family protein | DN752_RS05435 | Not Available | - | 1427720 - 1429372 | 59440.6 |
| laci family dna-binding transcriptional regulator | DN752_RS05440 | Not Available | + | 1429734 - 1430756 | 38150.3 |
| winged helix-turn-helix transcriptional regulator | DN752_RS05445 | Not Available | - | 1430801 - 1431142 | 13100.2 |
| yhdh/yhfp family quinone oxidoreductase | DN752_RS05450 | Not Available | + | 1431251 - 1432243 | 35261.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.