Echinicola strongylocentroti strain MEBiC08714

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Cyclobacteriaceae

Genus

Echinicola

Description

Echinicola strongylocentroti strain MEBiC08714 is a Gram-negative, rod-shaped bacterium that exhibits heterotrophic metabolism and requires aerobic conditions for growth, with an optimal growth temperature of 25.0 °C. This strain is characterized by its capacity to utilize organic compounds as an energy source, which is typical for many members of the Echinicola genus. The Gram-negative cell wall structure of E. strongylocentroti suggests a potential for diverse interactions with its environment, including possible roles in nutrient cycling or symbiotic relationships. Its aerobic nature indicates a preference for oxygen-rich environments, which may limit its habitat to specific ecological niches where oxygen is readily available. The optimal growth temperature of 25.0 °C aligns with the typical thermal range for mesophilic organisms, indicating that this strain might thrive in moderate climates or environments that are not subject to extreme temperature fluctuations. Understanding the metabolic capabilities and growth conditions of Echinicola strongylocentroti strain MEBiC08714 could provide insights into its ecological role, particularly in marine or freshwater ecosystems where such heterotrophic bacteria contribute to the decomposition of organic matter. This could have implications for the broader microbial community dynamics and biogeochemical processes within its native habitats.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyCyclobacteriaceae
GenusEchinicola
SpeciesEchinicola strongylocentroti
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceheterotroph
PathogenicityNot Available

Genome Summary

Echinicola strongylocentroti strain MEBiC08714

Accession NumberNZ_CP030041.1

Gene Summary

Adenine Count

1744517 bp

Thymine Count

1747944 bp

Guanine Count

1384406 bp

Cytosine Count

1375277 bp

Genome Length

6252144 bp

Protein-coding Genes

4741 genes

Non-Coding Genes

79 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
zinc-binding alcohol dehydrogenase family proteinDN752_RS05355Not Available+1399856 - 140087837118.0
l-fucose:h+ symporter permeaseDN752_RS05360Not Available+1400895 - 140215746147.7
l-rhamnose mutarotaseDN752_RS05365Not Available+1402160 - 140285227082.7
alpha-l-fucosidaseDN752_RS05370Not Available+1402858 - 140438158605.6
alpha-l-fucosidaseDN752_RS05375Not Available+1404415 - 140596259471.1
arylsulfataseDN752_RS05380Not Available+1405974 - 140779168171.2
family 16 glycosylhydrolaseDN752_RS05385Not Available-1408196 - 140899030735.4
glycoside hydrolase family 2 tim barrel-domain containing proteinDN752_RS05390Not Available-1409185 - 1412349120907.0
glycoside hydrolase family 117 proteinDN752_RS05395Not Available-1412593 - 141387348023.9
family 43 glycosylhydrolaseDN752_RS24730Not Available-1413870 - 141619188643.4

Displaying genes 1111 – 1120 of 4820 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites