Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola strongylocentroti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Echinicola strongylocentroti strain MEBiC08714
Accession NumberNZ_CP030041.1
Gene Summary
Adenine Count
1744517 bp
Thymine Count
1747944 bp
Guanine Count
1384406 bp
Cytosine Count
1375277 bp
Genome Length
6252144 bp
Protein-coding Genes
4741 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| zinc-binding alcohol dehydrogenase family protein | DN752_RS05355 | Not Available | + | 1399856 - 1400878 | 37118.0 |
| l-fucose:h+ symporter permease | DN752_RS05360 | Not Available | + | 1400895 - 1402157 | 46147.7 |
| l-rhamnose mutarotase | DN752_RS05365 | Not Available | + | 1402160 - 1402852 | 27082.7 |
| alpha-l-fucosidase | DN752_RS05370 | Not Available | + | 1402858 - 1404381 | 58605.6 |
| alpha-l-fucosidase | DN752_RS05375 | Not Available | + | 1404415 - 1405962 | 59471.1 |
| arylsulfatase | DN752_RS05380 | Not Available | + | 1405974 - 1407791 | 68171.2 |
| family 16 glycosylhydrolase | DN752_RS05385 | Not Available | - | 1408196 - 1408990 | 30735.4 |
| glycoside hydrolase family 2 tim barrel-domain containing protein | DN752_RS05390 | Not Available | - | 1409185 - 1412349 | 120907.0 |
| glycoside hydrolase family 117 protein | DN752_RS05395 | Not Available | - | 1412593 - 1413873 | 48023.9 |
| family 43 glycosylhydrolase | DN752_RS24730 | Not Available | - | 1413870 - 1416191 | 88643.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.