Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola strongylocentroti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Echinicola strongylocentroti strain MEBiC08714
Accession NumberNZ_CP030041.1
Gene Summary
Adenine Count
1744517 bp
Thymine Count
1747944 bp
Guanine Count
1384406 bp
Cytosine Count
1375277 bp
Genome Length
6252144 bp
Protein-coding Genes
4741 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| two-component regulator propeller domain-containing protein | DN752_RS05215 | Not Available | - | 1352878 - 1353507 | 23399.8 |
| thioredoxin domain-containing protein | DN752_RS05220 | Not Available | - | 1353686 - 1355809 | 80147.7 |
| vcbs repeat-containing protein | DN752_RS05225 | Not Available | - | 1355821 - 1359120 | 121128.0 |
| ragb/susd family nutrient uptake outer membrane protein | DN752_RS05230 | Not Available | - | 1359273 - 1360832 | 58642.3 |
| susc/raga family tonb-linked outer membrane protein | DN752_RS05235 | Not Available | - | 1360854 - 1363928 | 112137.0 |
| sodium/sugar symporter | DN752_RS05240 | Not Available | - | 1364127 - 1365770 | 59567.1 |
| glycoside hydrolase family 2 tim barrel-domain containing protein | DN752_RS05245 | Not Available | - | 1365800 - 1368355 | 96799.7 |
| glycoside hydrolase family 2 tim barrel-domain containing protein | DN752_RS05250 | Not Available | - | 1368361 - 1370892 | 95070.1 |
| hypothetical protein | DN752_RS25125 | Not Available | + | 1370932 - 1371066 | 4812.46 |
| arylsulfatase | DN752_RS05255 | Not Available | - | 1371218 - 1372993 | 66901.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.