Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola strongylocentroti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Echinicola strongylocentroti strain MEBiC08714
Accession NumberNZ_CP030041.1
Gene Summary
Adenine Count
1744517 bp
Thymine Count
1747944 bp
Guanine Count
1384406 bp
Cytosine Count
1375277 bp
Genome Length
6252144 bp
Protein-coding Genes
4741 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| zinc-binding alcohol dehydrogenase family protein | DN752_RS05020 | Not Available | - | 1297875 - 1298885 | 36343.9 |
| sulfatase | DN752_RS05025 | Not Available | - | 1299170 - 1300873 | 66305.9 |
| sulfatase-like hydrolase/transferase | DN752_RS05030 | Not Available | - | 1300863 - 1302377 | 56381.1 |
| gfo/idh/moca family protein | DN752_RS05035 | Not Available | - | 1302374 - 1303696 | 49540.0 |
| smp-30/gluconolactonase/lre family protein | DN752_RS05040 | Not Available | + | 1303854 - 1304774 | 34060.4 |
| sulfatase-like hydrolase/transferase | DN752_RS05045 | Not Available | - | 1304968 - 1306824 | 71254.2 |
| duf5060 domain-containing protein | DN752_RS05050 | Not Available | - | 1306841 - 1308652 | 68509.9 |
| l-rhamnose mutarotase | DN752_RS05055 | Not Available | - | 1308680 - 1309078 | 15473.4 |
| alpha-l-fucosidase | DN752_RS05060 | Not Available | - | 1309433 - 1310968 | 58556.2 |
| carbohydrate binding domain-containing protein | DN752_RS05065 | Not Available | - | 1311056 - 1312606 | 58017.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.