Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola strongylocentroti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Echinicola strongylocentroti strain MEBiC08714
Accession NumberNZ_CP030041.1
Gene Summary
Adenine Count
1744517 bp
Thymine Count
1747944 bp
Guanine Count
1384406 bp
Cytosine Count
1375277 bp
Genome Length
6252144 bp
Protein-coding Genes
4741 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | DN752_RS04865 | Not Available | - | 1244155 - 1245786 | 61532.8 |
| susc/raga family tonb-linked outer membrane protein | DN752_RS04870 | Not Available | - | 1245815 - 1248973 | 116220.0 |
| glycoside hydrolase family 88 protein | DN752_RS04875 | Not Available | - | 1249066 - 1250301 | 46383.0 |
| hypothetical protein | DN752_RS24385 | Not Available | - | 1250560 - 1250703 | 5441.73 |
| two-component regulator propeller domain-containing protein | DN752_RS04880 | Not Available | + | 1250837 - 1254955 | 157395.0 |
| hypothetical protein | DN752_RS04885 | Not Available | + | 1255270 - 1255461 | 6741.07 |
| tonb-dependent receptor | DN752_RS04890 | Not Available | + | 1255608 - 1257995 | 88952.4 |
| heparan-alpha-glucosaminide n-acetyltransferase domain-containing protein | DN752_RS04900 | Not Available | + | 1258224 - 1259234 | 38160.8 |
| susc/raga family tonb-linked outer membrane protein | DN752_RS04905 | Not Available | + | 1259646 - 1262765 | 114771.0 |
| ragb/susd family nutrient uptake outer membrane protein | DN752_RS04910 | Not Available | + | 1262784 - 1264502 | 64513.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.