Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Membrane protein | YT1_RS11430 | Not Available | - | 2232493 - 2232786 | 10357.6 |
| Hypothetical protein | YT1_RS11435 | Not Available | - | 2232786 - 2233517 | 26157.9 |
| hypothetical protein | YT1_RS11440 | Not Available | - | 2233654 - 2233905 | 9072.39 |
| hypothetical protein | YT1_RS11445 | Not Available | - | 2233910 - 2234302 | 14721.4 |
| Hypothetical protein | YT1_RS11450 | Not Available | - | 2234302 - 2234721 | 15099.1 |
| hypothetical protein | YT1_RS11455 | Not Available | - | 2234724 - 2235125 | 13763.4 |
| hypothetical protein | YT1_RS11460 | Not Available | - | 2235119 - 2235454 | 12546.0 |
| Capsid | YT1_RS11465 | Not Available | - | 2235457 - 2237040 | 57204.6 |
| Putative head maturation protease | YT1_RS11470 | Not Available | - | 2237037 - 2237444 | 14478.1 |
| Portal protein | YT1_RS11475 | Not Available | - | 2237441 - 2238622 | 43363.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

