Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| stk1 family pasta domain-containing ser/thr kinase | YT1_RS01245 | Not Available | - | 38401 - 40314 | 66817.2 |
| serine/threonine-protein kinase | YT1_RS01250 | Not Available | - | 40311 - 41834 | 52142.5 |
| peptidoglycan d,d-transpeptidase ftsi family protein | YT1_RS01255 | Not Available | - | 41837 - 43321 | 51426.8 |
| ftsw/roda/spove family cell cycle protein | YT1_RS01260 | Not Available | - | 43318 - 44769 | 51371.0 |
| helix-turn-helix transcriptional regulator | YT1_RS01265 | Not Available | - | 44769 - 46201 | 51290.8 |
| fha domain-containing protein fhab | YT1_RS01270 | Not Available | - | 46198 - 46662 | 16832.5 |
| fhaa domain-containing protein | YT1_RS01275 | Not Available | - | 46823 - 48154 | 47853.2 |
| Trna-leu | Not Available | Not Available | + | 48293 - 48378 | Not Available |
| hypothetical protein | YT1_RS01285 | Not Available | - | 48445 - 48777 | 11817.8 |
| acetolactate synthase | YT1_RS01290 | Not Available | - | 49261 - 50907 | 56691.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

