Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lipase family protein | YT1_RS01200 | Not Available | + | 29905 - 31191 | 44538.7 |
| acyl-coa dehydrogenase family protein | YT1_RS01205 | Not Available | - | 31284 - 33227 | 70679.6 |
| hypothetical protein | YT1_RS27045 | Not Available | + | 33465 - 33632 | 5968.34 |
| alginate biosynthesis protein algp | YT1_RS01210 | Not Available | - | 33645 - 34517 | 28768.1 |
| peptidylprolyl isomerase | YT1_RS01215 | Not Available | + | 34607 - 35134 | 18754.9 |
| rhomboid family intramembrane serine protease | YT1_RS01220 | Not Available | + | 35147 - 36073 | 32054.7 |
| ph domain-containing protein | YT1_RS01225 | Not Available | - | 36058 - 36510 | 15881.5 |
| cell division protein crga | YT1_RS01230 | Not Available | - | 36577 - 36840 | 9941.56 |
| duf881 domain-containing protein | YT1_RS01235 | Not Available | + | 36970 - 37695 | 24992.3 |
| aminodeoxychorismate/anthranilate synthase component ii | YT1_RS01240 | Not Available | + | 37716 - 38372 | 23095.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

