Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | YT1_RS11520 | Not Available | - | 2243796 - 2243993 | 6965.52 |
| Immunity repressor | YT1_RS11525 | Not Available | + | 2244085 - 2244393 | 11498.5 |
| Attr | Not Available | Not Available | + | 2244356 - 2244392 | Not Available |
| chromosomal replication initiator protein dnaa | YT1_RS01065 | Not Available | + | 106 - 1767 | 62129.9 |
| dna polymerase iii subunit beta | YT1_RS01070 | Not Available | + | 2304 - 3488 | 41422.8 |
| dna replication/repair protein recf | YT1_RS01075 | Not Available | + | 3514 - 4767 | 45062.7 |
| duf721 family protein | YT1_RS01080 | Not Available | + | 4764 - 5312 | 19602.2 |
| metal-dependent hydrolase | YT1_RS01085 | Not Available | + | 5401 - 6291 | 33201.7 |
| pdr/vanb family oxidoreductase | YT1_RS01090 | Not Available | + | 6288 - 7376 | 38714.3 |
| alpha/beta fold hydrolase | YT1_RS01095 | Not Available | + | 7386 - 8288 | 33627.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

