Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Transposase dna binding domain protein | YT1_RS11385 | Not Available | + | 2221491 - 2222654 | 43601.5 |
| Hydrolase | YT1_RS11390 | Not Available | - | 2222685 - 2223524 | 29814.7 |
| Attl | Not Available | Not Available | + | 2223867 - 2223903 | Not Available |
| Putative integrase | YT1_RS27820 | Not Available | + | 2223984 - 2224799 | 29720.7 |
| hypothetical protein | YT1_RS11400 | Not Available | + | 2224810 - 2225055 | 8457.23 |
| Hypothetical protein | YT1_RS11405 | Not Available | - | 2225062 - 2225550 | 16061.0 |
| Minor tail protein | YT1_RS11410 | Not Available | - | 2225550 - 2226482 | 31336.6 |
| Hypothetical protein | YT1_RS11415 | Not Available | - | 2226496 - 2229375 | 103430.0 |
| Hypothetical protein | YT1_RS11420 | Not Available | - | 2229401 - 2232199 | 96122.9 |
| hypothetical protein | YT1_RS11425 | Not Available | - | 2232203 - 2232496 | 10542.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

