Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas frederiksbergensis |
| Strain | strain KNU-15 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1345408 bp
Thymine Count
1335750 bp
Guanine Count
1955777 bp
Cytosine Count
1958869 bp
Genome Length
6595804 bp
Protein-coding Genes
5869 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hcp family type vi secretion system effector | CNN82_RS00640 | Not Available | Negative | 143728 - 144216 | 17538.1 |
| type vi secretion system contractile sheath large subunit | CNN82_RS00645 | Not Available | Negative | 144303 - 145796 | 55510.4 |
| type vi secretion system contractile sheath small subunit | CNN82_RS00650 | Not Available | Negative | 145812 - 146321 | 18528.4 |
| type vi secretion system protein tssa | CNN82_RS00655 | Not Available | Negative | 146402 - 147439 | 37437.0 |
| type vi secretion system-associated fha domain protein tagh | CNN82_RS00660 | Not Available | Positive | 147844 - 149280 | 52541.3 |
| type vi secretion system lipoprotein tssj | CNN82_RS00665 | Not Available | Positive | 149356 - 149862 | 18280.8 |
| type vi secretion system baseplate subunit tssk | CNN82_RS00670 | Not Available | Positive | 149878 - 151212 | 48614.4 |
| dotu family type vi secretion system protein | CNN82_RS00675 | Not Available | Positive | 151219 - 152517 | 47244.0 |
| type vi secretion system membrane subunit tssm | CNN82_RS00680 | Not Available | Positive | 152514 - 156014 | 129044.0 |
| type vi secretion system-associated protein tagf | CNN82_RS00685 | Not Available | Positive | 156011 - 156661 | 23017.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
