Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus sp. YGSMI21 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus sp. YGSMI21
Accession NumberNZ_CP022548.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3625 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| copper resistance protein copc | CHN51_RS00640 | Not Available | - | 130627 - 130992 | 13150.0 |
| apc family permease | CHN51_RS00645 | Not Available | - | 131126 - 132433 | 45473.9 |
| pyridoxal-phosphate dependent enzyme | CHN51_RS00650 | Not Available | - | 132430 - 133725 | 45609.8 |
| cystathionine beta-lyase | CHN51_RS00655 | Not Available | - | 133650 - 134822 | 42541.6 |
| lysr substrate-binding domain-containing protein | CHN51_RS00660 | Not Available | + | 135070 - 136041 | 35380.7 |
| tonb-dependent receptor plug domain-containing protein | CHN51_RS00665 | Not Available | - | 136269 - 138770 | 89223.9 |
| eco57i restriction-modification methylase domain-containing protein | CHN51_RS00670 | Not Available | + | 139400 - 143587 | 158423.0 |
| atp-binding protein | CHN51_RS00675 | Not Available | - | 143660 - 145492 | 67483.2 |
| sir2 family protein | CHN51_RS00680 | Not Available | - | 145489 - 146697 | 45278.2 |
| type i restriction enzyme hsdr n-terminal domain-containing protein | CHN51_RS00685 | Not Available | - | 146813 - 149227 | 89467.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.