Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus sp. YGSMI21 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus sp. YGSMI21
Accession NumberNZ_CP022548.1
Gene Summary
Adenine Count
806054 bp
Thymine Count
812740 bp
Guanine Count
1122214 bp
Cytosine Count
1123168 bp
Genome Length
3864176 bp
Protein-coding Genes
3625 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l11 | CHN51_RS03705 | Not Available | + | 775818 - 776249 | 15071.3 |
| 50s ribosomal protein l1 | CHN51_RS03710 | Not Available | + | 776254 - 776955 | 24572.9 |
| transglutaminase-like domain-containing protein | CHN51_RS03715 | Not Available | + | 777065 - 777844 | 27946.1 |
| gfa family protein | CHN51_RS03720 | Not Available | + | 777926 - 778306 | 14124.6 |
| 50s ribosomal protein l10 | CHN51_RS03725 | Not Available | + | 778877 - 779389 | 17571.2 |
| 50s ribosomal protein l7/l12 | CHN51_RS03730 | Not Available | + | 779432 - 779806 | 12528.0 |
| hypothetical protein | CHN51_RS03735 | Not Available | + | 780044 - 780574 | 19836.7 |
| adenine phosphoribosyltransferase | CHN51_RS03740 | Not Available | + | 780626 - 781165 | 19003.2 |
| 5'-methylthioadenosine/s-adenosylhomocysteine nucleosidase | CHN51_RS03745 | Not Available | + | 781158 - 781877 | 25683.3 |
| carotenoid oxygenase family protein | CHN51_RS03750 | Not Available | - | 781978 - 783420 | 53800.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.