Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus sp. YGSMI21 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus sp. YGSMI21
Accession NumberNZ_CP022548.1
Gene Summary
Adenine Count
806054 bp
Thymine Count
812740 bp
Guanine Count
1122214 bp
Cytosine Count
1123168 bp
Genome Length
3864176 bp
Protein-coding Genes
3625 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| fkbp-type peptidyl-prolyl cis-trans isomerase | CHN51_RS03555 | Not Available | - | 752382 - 752945 | 19694.6 |
| 30s ribosomal protein s21 | CHN51_RS03560 | Not Available | - | 752981 - 753187 | 8310.34 |
| class ii aldolase/adducin family protein | CHN51_RS03565 | Not Available | + | 753447 - 754211 | 28575.4 |
| (2fe-2s)-binding protein | CHN51_RS03570 | Not Available | + | 754311 - 754850 | 19184.0 |
| arsenate reductase (glutaredoxin) | CHN51_RS03575 | Not Available | + | 754953 - 755303 | 12851.5 |
| para family protein | CHN51_RS03580 | Not Available | + | 755351 - 756082 | 26987.1 |
| putative bifunctional diguanylate cyclase/phosphodiesterase | CHN51_RS03585 | Not Available | - | 756098 - 758467 | 86862.1 |
| fatty acyl-amp ligase | CHN51_RS03590 | Not Available | - | 758556 - 760286 | 62921.8 |
| regulatory protein recx | CHN51_RS03595 | Not Available | + | 760507 - 760989 | 18531.9 |
| cold-shock protein | CHN51_RS03600 | Not Available | + | 761142 - 761756 | 22203.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.