Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus sp. YGSMI21 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus sp. YGSMI21
Accession NumberNZ_CP022548.1
Gene Summary
Adenine Count
806054 bp
Thymine Count
812740 bp
Guanine Count
1122214 bp
Cytosine Count
1123168 bp
Genome Length
3864176 bp
Protein-coding Genes
3625 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| esterase-like activity of phytase family protein | CHN51_RS03505 | Not Available | + | 743587 - 744660 | 39340.7 |
| 50s ribosomal protein l28 | CHN51_RS03510 | Not Available | - | 744665 - 744955 | 10731.3 |
| nucleoside deaminase | CHN51_RS03515 | Not Available | + | 745146 - 745577 | 15535.3 |
| lytr/algr family response regulator transcription factor | CHN51_RS03520 | Not Available | - | 745581 - 746381 | 30375.6 |
| sensor histidine kinase | CHN51_RS03525 | Not Available | - | 746378 - 747610 | 45400.4 |
| hd domain-containing protein | CHN51_RS03530 | Not Available | + | 747772 - 748353 | 22239.0 |
| winged helix-turn-helix transcriptional regulator | CHN51_RS03535 | Not Available | - | 748373 - 748912 | 20320.4 |
| cc_3452 family protein | CHN51_RS03540 | Not Available | + | 749087 - 749416 | 11393.7 |
| rela/spot family protein | CHN51_RS03545 | Not Available | + | 749591 - 751681 | 78847.2 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | CHN51_RS03550 | Not Available | - | 751700 - 752314 | 21735.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.