Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus sp. YGSMI21 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus sp. YGSMI21
Accession NumberNZ_CP022548.1
Gene Summary
Adenine Count
806054 bp
Thymine Count
812740 bp
Guanine Count
1122214 bp
Cytosine Count
1123168 bp
Genome Length
3864176 bp
Protein-coding Genes
3625 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| bacterioferritin-associated ferredoxin | CHN51_RS03200 | Not Available | + | 686090 - 686260 | 6008.44 |
| bacterioferritin | CHN51_RS03205 | Not Available | + | 686383 - 686859 | 18627.1 |
| hpt domain-containing protein | CHN51_RS03210 | Not Available | - | 686876 - 687289 | 15125.2 |
| ribosome biogenesis gtpase der | CHN51_RS03215 | Not Available | - | 687409 - 688800 | 50970.4 |
| pqq-binding-like beta-propeller repeat protein | CHN51_RS03220 | Not Available | - | 688832 - 690166 | 45788.4 |
| tetratricopeptide repeat protein | CHN51_RS03225 | Not Available | - | 690163 - 690933 | 27844.9 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | CHN51_RS03230 | Not Available | - | 691091 - 691963 | 30901.3 |
| tcr/tet family mfs transporter | CHN51_RS03235 | Not Available | + | 692104 - 693336 | 43806.9 |
| glycerophosphodiester phosphodiesterase | CHN51_RS03240 | Not Available | - | 693312 - 694313 | 36100.6 |
| duf427 domain-containing protein | CHN51_RS03245 | Not Available | - | 694403 - 694684 | 10430.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.