Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus sp. YGSMI21 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus sp. YGSMI21
Accession NumberNZ_CP022548.1
Gene Summary
Adenine Count
806054 bp
Thymine Count
812740 bp
Guanine Count
1122214 bp
Cytosine Count
1123168 bp
Genome Length
3864176 bp
Protein-coding Genes
3625 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf2141 domain-containing protein | CHN51_RS03050 | Not Available | - | 658437 - 658919 | 17281.0 |
| lps export abc transporter permease lptf | CHN51_RS03055 | Not Available | + | 659052 - 660257 | 44568.3 |
| lps export abc transporter permease lptg | CHN51_RS03060 | Not Available | + | 660264 - 661352 | 39394.3 |
| fatty acid desaturase family protein | CHN51_RS03065 | Not Available | - | 661358 - 662458 | 40026.1 |
| n-acetyltransferase | CHN51_RS03070 | Not Available | + | 662605 - 663765 | 43943.5 |
| exodeoxyribonuclease iii | CHN51_RS03075 | Not Available | - | 663794 - 664582 | 29847.1 |
| iron-sulfur cluster insertion protein erpa | CHN51_RS03080 | Not Available | - | 664583 - 664933 | 11926.0 |
| m23 family metallopeptidase | CHN51_RS03085 | Not Available | - | 665025 - 665693 | 23516.0 |
| ferritin-like domain-containing protein | CHN51_RS03090 | Not Available | - | 665837 - 666634 | 30213.2 |
| peroxiredoxin | CHN51_RS03095 | Not Available | - | 666644 - 667105 | 16599.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.