Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus sp. YGSMI21 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus sp. YGSMI21
Accession NumberNZ_CP022548.1
Gene Summary
Adenine Count
806054 bp
Thymine Count
812740 bp
Guanine Count
1122214 bp
Cytosine Count
1123168 bp
Genome Length
3864176 bp
Protein-coding Genes
3625 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gtpase obge | CHN51_RS03000 | Not Available | + | 649974 - 651038 | 37411.3 |
| glutamate 5-kinase | CHN51_RS03005 | Not Available | + | 651035 - 652144 | 39120.5 |
| nad-dependent epimerase/dehydratase family protein | CHN51_RS03010 | Not Available | + | 652150 - 653082 | 33792.6 |
| pycsar system effector family protein | CHN51_RS03015 | Not Available | - | 653083 - 653607 | 19481.7 |
| acyl carrier protein | CHN51_RS03020 | Not Available | + | 653771 - 654016 | 8949.7 |
| serine palmitoyltransferase | CHN51_RS03025 | Not Available | + | 654108 - 655307 | 43227.3 |
| hypothetical protein | CHN51_RS03030 | Not Available | + | 655307 - 655573 | 9748.54 |
| enoyl-coa hydratase/isomerase family protein | CHN51_RS03035 | Not Available | + | 655583 - 656377 | 29306.6 |
| hypothetical protein | CHN51_RS03040 | Not Available | - | 656494 - 657411 | 34083.1 |
| diacylglycerol/lipid kinase family protein | CHN51_RS03045 | Not Available | - | 657427 - 658401 | 35100.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.