Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus sp. YGSMI21 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus sp. YGSMI21
Accession NumberNZ_CP022548.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3625 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putative entry exclusion protein trbk-alt | CHN51_RS18465 | Not Available | - | 3850181 - 3850543 | 12739.3 |
| p-type conjugative transfer protein trbj | CHN51_RS18470 | Not Available | - | 3850560 - 3851300 | 26255.4 |
| conjugal transfer protein trbe | CHN51_RS18475 | Not Available | - | 3851297 - 3853783 | 90668.9 |
| virb3 family type iv secretion system protein | CHN51_RS18480 | Not Available | - | 3853791 - 3854072 | 10041.4 |
| trbc/virb2 family protein | CHN51_RS18485 | Not Available | - | 3854072 - 3854404 | 11255.0 |
| p-type conjugative transfer atpase trbb | CHN51_RS18490 | Not Available | - | 3854401 - 3855396 | 35248.8 |
| ribbon-helix-helix protein, copg family | CHN51_RS18495 | Not Available | - | 3855592 - 3856008 | 15504.5 |
| conjugal transfer protein trag | CHN51_RS18500 | Not Available | - | 3856011 - 3858047 | 74969.1 |
| sh3 domain-containing protein | CHN51_RS18505 | Not Available | + | 3858335 - 3859747 | 52308.2 |
| relaxase/mobilization nuclease domain-containing protein | CHN51_RS18510 | Not Available | - | 3859826 - 3861556 | 64039.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.