Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus sp. YGSMI21 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus sp. YGSMI21
Accession NumberNZ_CP022548.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3625 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rip metalloprotease rsep | CHN51_RS17875 | Not Available | - | 3728452 - 3729576 | 41116.7 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | CHN51_RS17880 | Not Available | - | 3729573 - 3730733 | 40969.1 |
| phosphatidate cytidylyltransferase | CHN51_RS17885 | Not Available | - | 3730730 - 3731533 | 28082.3 |
| isoprenyl transferase | CHN51_RS17890 | Not Available | - | 3731536 - 3732246 | 26478.7 |
| ribosome recycling factor | CHN51_RS17895 | Not Available | - | 3732300 - 3732857 | 20810.0 |
| ump kinase | CHN51_RS17900 | Not Available | - | 3732881 - 3733603 | 25531.9 |
| translation elongation factor ts | CHN51_RS17905 | Not Available | - | 3733723 - 3734649 | 32185.5 |
| 30s ribosomal protein s2 | CHN51_RS17910 | Not Available | - | 3734758 - 3735621 | 30314.1 |
| pas domain s-box protein | CHN51_RS17915 | Not Available | - | 3735863 - 3738133 | 82462.7 |
| hypothetical protein | CHN51_RS17920 | Not Available | + | 3738316 - 3738558 | 8856.97 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.