Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus sp. YGSMI21 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus sp. YGSMI21
Accession NumberNZ_CP022548.1
Gene Summary
Adenine Count
806054 bp
Thymine Count
812740 bp
Guanine Count
1122214 bp
Cytosine Count
1123168 bp
Genome Length
3864176 bp
Protein-coding Genes
3625 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| n-formylglutamate amidohydrolase | CHN51_RS15445 | Not Available | - | 3226736 - 3227464 | 27019.1 |
| 4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinase | CHN51_RS15450 | Not Available | - | 3227461 - 3228315 | 29776.9 |
| tetratricopeptide repeat protein | CHN51_RS15455 | Not Available | - | 3228315 - 3229790 | 53885.7 |
| electron transfer flavoprotein-ubiquinone oxidoreductase | CHN51_RS15460 | Not Available | - | 3229972 - 3231627 | 60917.6 |
| uracil-dna glycosylase family protein | CHN51_RS15465 | Not Available | + | 3231756 - 3232532 | 28777.4 |
| lytic transglycosylase domain-containing protein | CHN51_RS15470 | Not Available | + | 3232529 - 3234271 | 63691.0 |
| adenosylhomocysteinase | CHN51_RS15475 | Not Available | - | 3234348 - 3235748 | 51246.4 |
| yqge/algh family protein | CHN51_RS15480 | Not Available | - | 3235906 - 3236466 | 20363.8 |
| peroxiredoxin | CHN51_RS15485 | Not Available | + | 3236622 - 3237098 | 16515.5 |
| hypothetical protein | CHN51_RS15490 | Not Available | - | 3237093 - 3238451 | 49018.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.