Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus sp. YGSMI21 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus sp. YGSMI21
Accession NumberNZ_CP022548.1
Gene Summary
Adenine Count
806054 bp
Thymine Count
812740 bp
Guanine Count
1122214 bp
Cytosine Count
1123168 bp
Genome Length
3864176 bp
Protein-coding Genes
3625 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dtmp kinase | CHN51_RS15045 | Not Available | - | 3128988 - 3129617 | 22927.3 |
| d-alanyl-d-alanine carboxypeptidase family protein | CHN51_RS15050 | Not Available | - | 3129614 - 3130756 | 40745.7 |
| septal ring lytic transglycosylase rlpa family protein | CHN51_RS15055 | Not Available | - | 3130796 - 3131794 | 34847.8 |
| lytic transglycosylase domain-containing protein | CHN51_RS15060 | Not Available | - | 3131805 - 3132779 | 35409.1 |
| Trna-ser | Not Available | Not Available | + | 3133045 - 3133134 | Not Available |
| efflux transporter outer membrane subunit | CHN51_RS15070 | Not Available | - | 3133281 - 3134696 | 51013.1 |
| multidrug efflux rnd transporter permease subunit | CHN51_RS15075 | Not Available | - | 3134693 - 3137917 | 114964.0 |
| efflux rnd transporter periplasmic adaptor subunit | CHN51_RS15080 | Not Available | - | 3137962 - 3139161 | 42363.6 |
| thiolase family protein | CHN51_RS15085 | Not Available | + | 3139640 - 3140812 | 41712.9 |
| acyl-coa thioesterase | CHN51_RS15090 | Not Available | + | 3140862 - 3141791 | 34996.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.