Sphingorhabdus sp. YGSMI21

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingorhabdaceae

Genus

Sphingorhabdus

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingorhabdaceae
GenusSphingorhabdus
SpeciesSphingorhabdus sp. YGSMI21
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingorhabdus sp. YGSMI21

Accession NumberNZ_CP022548.1

Gene Summary

Adenine Count

806054 bp

Thymine Count

812740 bp

Guanine Count

1122214 bp

Cytosine Count

1123168 bp

Genome Length

3864176 bp

Protein-coding Genes

3625 genes

Non-Coding Genes

97 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
fur family transcriptional regulatorCHN51_RS14600Not Available-3045687 - 304610915967.0
mucr family transcriptional regulatorCHN51_RS14605Not Available-3046223 - 304663915095.4
ribosomal protein s18-alanine n-acetyltransferaseCHN51_RS14610Not Available-3046747 - 304725018886.8
trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex dimerization subunit type 1 tsabCHN51_RS14615Not Available-3047254 - 304788021728.1
malonic semialdehyde reductaseCHN51_RS14620Not Available-3047888 - 304848122018.0
nifu family proteinCHN51_RS14625Not Available-3048506 - 304907820303.1
m16 family metallopeptidaseCHN51_RS14630Not Available+3049193 - 3052099106958.0
peroxiredoxin family proteinCHN51_RS14635Not Available-3052117 - 305274922553.5
atp-dependent protease atpase subunit hsluCHN51_RS14640Not Available-3052885 - 305418648386.1
atp-dependent protease subunit hslvCHN51_RS14645Not Available-3054230 - 305479620560.6

Displaying genes 3121 – 3130 of 3914 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites