Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus sp. YGSMI21 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus sp. YGSMI21
Accession NumberNZ_CP022548.1
Gene Summary
Adenine Count
806054 bp
Thymine Count
812740 bp
Guanine Count
1122214 bp
Cytosine Count
1123168 bp
Genome Length
3864176 bp
Protein-coding Genes
3625 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| succinate dehydrogenase flavoprotein subunit | CHN51_RS14105 | Not Available | + | 2933947 - 2935764 | 65981.1 |
| giy-yig nuclease family protein | CHN51_RS14110 | Not Available | - | 2936427 - 2936873 | 16969.2 |
| lyse family translocator | CHN51_RS14115 | Not Available | + | 2936849 - 2937469 | 21922.4 |
| hypothetical protein | CHN51_RS14120 | Not Available | - | 2937516 - 2938028 | 18135.1 |
| hypothetical protein | CHN51_RS14125 | Not Available | - | 2938061 - 2938552 | 17179.6 |
| alpha-hydroxy acid oxidase | CHN51_RS14130 | Not Available | - | 2938575 - 2939723 | 42150.5 |
| cell envelope integrity protein cred | CHN51_RS14135 | Not Available | + | 2939853 - 2941268 | 50640.1 |
| neutral zinc metallopeptidase | CHN51_RS14140 | Not Available | - | 2941311 - 2942219 | 31835.4 |
| 3-hydroxybutyrate dehydrogenase | CHN51_RS14145 | Not Available | + | 2942345 - 2943130 | 27682.2 |
| duf4893 domain-containing protein | CHN51_RS14150 | Not Available | + | 2943127 - 2943714 | 21227.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.