Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus sp. YGSMI21 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus sp. YGSMI21
Accession NumberNZ_CP022548.1
Gene Summary
Adenine Count
806054 bp
Thymine Count
812740 bp
Guanine Count
1122214 bp
Cytosine Count
1123168 bp
Genome Length
3864176 bp
Protein-coding Genes
3625 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| class i sam-dependent methyltransferase | CHN51_RS14000 | Not Available | + | 2912300 - 2913010 | 26721.6 |
| trna pseudouridine(55) synthase trub | CHN51_RS14005 | Not Available | + | 2912992 - 2913999 | 35784.3 |
| 30s ribosomal protein s15 | CHN51_RS14010 | Not Available | + | 2914024 - 2914293 | 10386.8 |
| polyribonucleotide nucleotidyltransferase | CHN51_RS14015 | Not Available | + | 2914468 - 2916747 | 81828.6 |
| outer membrane protein assembly factor bamd | CHN51_RS14020 | Not Available | + | 2916941 - 2917726 | 29327.8 |
| dna repair protein recn | CHN51_RS14025 | Not Available | + | 2917784 - 2919448 | 59174.3 |
| heat repeat domain-containing protein | CHN51_RS14030 | Not Available | + | 2919448 - 2919942 | 18371.4 |
| nad-dependent dna ligase liga | CHN51_RS14035 | Not Available | + | 2919932 - 2922244 | 83645.2 |
| sterol desaturase family protein | CHN51_RS14040 | Not Available | - | 2922652 - 2923509 | 32298.6 |
| crp/fnr family transcriptional regulator | CHN51_RS14045 | Not Available | + | 2923598 - 2924263 | 23504.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.