Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus sp. YGSMI21 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus sp. YGSMI21
Accession NumberNZ_CP022548.1
Gene Summary
Adenine Count
806054 bp
Thymine Count
812740 bp
Guanine Count
1122214 bp
Cytosine Count
1123168 bp
Genome Length
3864176 bp
Protein-coding Genes
3625 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| isocitrate lyase | CHN51_RS13555 | Not Available | - | 2813388 - 2814980 | 58758.3 |
| slc13 family permease | CHN51_RS13560 | Not Available | - | 2815668 - 2817461 | 63615.5 |
| lipid ii flippase amj family protein | CHN51_RS13565 | Not Available | + | 2817650 - 2818453 | 28572.7 |
| hypothetical protein | CHN51_RS19835 | Not Available | - | 2818495 - 2818647 | 5497.81 |
| doxx family protein | CHN51_RS13575 | Not Available | - | 2818717 - 2819154 | 16015.7 |
| ion channel | CHN51_RS13580 | Not Available | - | 2819154 - 2819579 | 15599.3 |
| hypothetical protein | CHN51_RS13585 | Not Available | - | 2819586 - 2820227 | 23180.1 |
| cold-shock protein | CHN51_RS13590 | Not Available | + | 2820466 - 2820672 | 7309.48 |
| cupin domain-containing protein | CHN51_RS13595 | Not Available | - | 2820749 - 2821897 | 43266.7 |
| pseudouridine synthase | CHN51_RS13600 | Not Available | + | 2822029 - 2822574 | 20608.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.