Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus sp. YGSMI21 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus sp. YGSMI21
Accession NumberNZ_CP022548.1
Gene Summary
Adenine Count
806054 bp
Thymine Count
812740 bp
Guanine Count
1122214 bp
Cytosine Count
1123168 bp
Genome Length
3864176 bp
Protein-coding Genes
3625 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| csbd family protein | CHN51_RS13465 | Not Available | - | 2800491 - 2800661 | 5765.83 |
| paai family thioesterase | CHN51_RS19820 | Not Available | + | 2800951 - 2801397 | 16334.4 |
| hypothetical protein | CHN51_RS19825 | Not Available | - | 2801404 - 2801562 | 5758.17 |
| hypothetical protein | CHN51_RS19830 | Not Available | + | 2801688 - 2802530 | 30405.0 |
| carboxymuconolactone decarboxylase family protein | CHN51_RS13480 | Not Available | - | 2802561 - 2802980 | 14930.0 |
| ester cyclase | CHN51_RS13485 | Not Available | - | 2802977 - 2803432 | 16796.7 |
| marr family winged helix-turn-helix transcriptional regulator | CHN51_RS13490 | Not Available | + | 2803534 - 2804001 | 16621.1 |
| cupin-like domain-containing protein | CHN51_RS13495 | Not Available | + | 2804070 - 2804936 | 32652.0 |
| gfa family protein | CHN51_RS13500 | Not Available | - | 2805247 - 2805690 | 16006.9 |
| hypothetical protein | CHN51_RS13505 | Not Available | + | 2805830 - 2806216 | 13963.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.