Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus sp. YGSMI21 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus sp. YGSMI21
Accession NumberNZ_CP022548.1
Gene Summary
Adenine Count
806054 bp
Thymine Count
812740 bp
Guanine Count
1122214 bp
Cytosine Count
1123168 bp
Genome Length
3864176 bp
Protein-coding Genes
3625 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lipoxygenase family protein | CHN51_RS13365 | Not Available | + | 2777000 - 2778979 | 72605.1 |
| nadh:flavin oxidoreductase/nadh oxidase family protein | CHN51_RS13370 | Not Available | - | 2779020 - 2780312 | 46640.0 |
| hypothetical protein | CHN51_RS13375 | Not Available | + | 2780519 - 2780911 | 14488.0 |
| tldd/pmba family protein | CHN51_RS13380 | Not Available | + | 2781014 - 2782360 | 47004.2 |
| 3'(2'),5'-bisphosphate nucleotidase cysq | CHN51_RS13385 | Not Available | + | 2782446 - 2783234 | 28174.3 |
| phytoene/squalene synthase family protein | CHN51_RS13390 | Not Available | - | 2783231 - 2784166 | 34153.8 |
| phytoene desaturase | CHN51_RS13395 | Not Available | - | 2784267 - 2785778 | 55849.9 |
| lycopene beta-cyclase crty | CHN51_RS13400 | Not Available | - | 2785792 - 2786964 | 43501.1 |
| sterol desaturase family protein | CHN51_RS13405 | Not Available | + | 2787075 - 2787839 | 28838.1 |
| duf2141 domain-containing protein | CHN51_RS13410 | Not Available | + | 2787805 - 2788239 | 15358.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.