Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus sp. YGSMI21 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus sp. YGSMI21
Accession NumberNZ_CP022548.1
Gene Summary
Adenine Count
806054 bp
Thymine Count
812740 bp
Guanine Count
1122214 bp
Cytosine Count
1123168 bp
Genome Length
3864176 bp
Protein-coding Genes
3625 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CHN51_RS19815 | Not Available | + | 2748262 - 2748435 | 6871.43 |
| ecf-type sigma factor | CHN51_RS13220 | Not Available | + | 2748537 - 2749055 | 19788.9 |
| serine/threonine protein kinase | CHN51_RS13225 | Not Available | + | 2749057 - 2751402 | 86432.6 |
| Trna-lys | Not Available | Not Available | + | 2752020 - 2752095 | Not Available |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | CHN51_RS13235 | Not Available | - | 2752140 - 2752670 | 19359.6 |
| superoxide dismutase family protein | CHN51_RS13240 | Not Available | + | 2752787 - 2753338 | 18200.0 |
| low molecular weight protein-tyrosine-phosphatase | CHN51_RS13245 | Not Available | + | 2753375 - 2753839 | 17048.0 |
| bax inhibitor-1/ycca family protein | CHN51_RS13250 | Not Available | + | 2754110 - 2754844 | 26450.0 |
| hypothetical protein | CHN51_RS13255 | Not Available | + | 2755015 - 2755737 | 26840.8 |
| glutathione s-transferase family protein | CHN51_RS13260 | Not Available | - | 2755811 - 2756428 | 22416.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.