Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus sp. YGSMI21 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus sp. YGSMI21
Accession NumberNZ_CP022548.1
Gene Summary
Adenine Count
806054 bp
Thymine Count
812740 bp
Guanine Count
1122214 bp
Cytosine Count
1123168 bp
Genome Length
3864176 bp
Protein-coding Genes
3625 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat protein | CHN51_RS13070 | Not Available | + | 2699829 - 2701160 | 47442.2 |
| hypothetical protein | CHN51_RS13075 | Not Available | + | 2701190 - 2704903 | 125704.0 |
| sh3 domain-containing protein | CHN51_RS13080 | Not Available | + | 2705087 - 2705980 | 30302.2 |
| chat domain-containing tetratricopeptide repeat protein | CHN51_RS13085 | Not Available | - | 2706056 - 2708953 | 103611.0 |
| response regulator transcription factor | CHN51_RS13090 | Not Available | + | 2709168 - 2709851 | 25312.7 |
| sensor histidine kinase | CHN51_RS13095 | Not Available | + | 2709854 - 2711191 | 48558.4 |
| hypothetical protein | CHN51_RS13100 | Not Available | + | 2711193 - 2711825 | 22248.5 |
| sigma-54-dependent transcriptional regulator | CHN51_RS13105 | Not Available | - | 2711877 - 2713316 | 52161.4 |
| heme no-binding domain-containing protein | CHN51_RS13110 | Not Available | - | 2713321 - 2713851 | 19482.1 |
| polysaccharide biosynthesis/export family protein | CHN51_RS13115 | Not Available | + | 2714120 - 2715304 | 41582.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.