Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus sp. YGSMI21 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus sp. YGSMI21
Accession NumberNZ_CP022548.1
Gene Summary
Adenine Count
806054 bp
Thymine Count
812740 bp
Guanine Count
1122214 bp
Cytosine Count
1123168 bp
Genome Length
3864176 bp
Protein-coding Genes
3625 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase | CHN51_RS12970 | Not Available | - | 2677621 - 2678688 | 38845.6 |
| class i mannose-6-phosphate isomerase | CHN51_RS12975 | Not Available | - | 2678699 - 2679514 | 29850.2 |
| nucleoside-diphosphate sugar epimerase/dehydratase | CHN51_RS12980 | Not Available | + | 2679711 - 2680361 | 23448.2 |
| ld-carboxypeptidase | CHN51_RS12985 | Not Available | - | 2680316 - 2681173 | 30723.6 |
| glutamate ligase domain-containing protein | CHN51_RS12990 | Not Available | + | 2681208 - 2682605 | 48911.2 |
| hypothetical protein | CHN51_RS12995 | Not Available | + | 2683266 - 2683616 | 12449.9 |
| hypothetical protein | CHN51_RS13000 | Not Available | + | 2683718 - 2684332 | 21147.8 |
| pilz domain-containing protein | CHN51_RS13005 | Not Available | + | 2684333 - 2685250 | 33757.5 |
| winged helix-turn-helix domain-containing protein | CHN51_RS13010 | Not Available | - | 2685313 - 2686875 | 57825.8 |
| tetratricopeptide repeat protein | CHN51_RS13015 | Not Available | + | 2687056 - 2688747 | 62185.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.