Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus sp. YGSMI21 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus sp. YGSMI21
Accession NumberNZ_CP022548.1
Gene Summary
Adenine Count
806054 bp
Thymine Count
812740 bp
Guanine Count
1122214 bp
Cytosine Count
1123168 bp
Genome Length
3864176 bp
Protein-coding Genes
3625 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cbb3-type cytochrome c oxidase subunit 3 | CHN51_RS12870 | Not Available | - | 2655140 - 2655301 | 6156.31 |
| cytochrome-c oxidase, cbb3-type subunit ii | CHN51_RS12875 | Not Available | - | 2655298 - 2656032 | 27642.9 |
| cytochrome-c oxidase, cbb3-type subunit i | CHN51_RS12880 | Not Available | - | 2656046 - 2657704 | 62005.5 |
| endonuclease/exonuclease/phosphatase family protein | CHN51_RS12885 | Not Available | - | 2657804 - 2658499 | 25493.8 |
| dsre family protein | CHN51_RS12890 | Not Available | - | 2658518 - 2659063 | 18984.8 |
| gamma-glutamyltransferase family protein | CHN51_RS12895 | Not Available | - | 2659110 - 2660900 | 64051.6 |
| hypothetical protein | CHN51_RS12900 | Not Available | + | 2661286 - 2661861 | 22150.7 |
| class i sam-dependent methyltransferase | CHN51_RS12905 | Not Available | - | 2662114 - 2662950 | 31497.9 |
| m23 family metallopeptidase | CHN51_RS12910 | Not Available | - | 2663077 - 2664351 | 46917.0 |
| dead/deah box helicase | CHN51_RS12915 | Not Available | + | 2664796 - 2666169 | 49929.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.