Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus sp. YGSMI21 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus sp. YGSMI21
Accession NumberNZ_CP022548.1
Gene Summary
Adenine Count
806054 bp
Thymine Count
812740 bp
Guanine Count
1122214 bp
Cytosine Count
1123168 bp
Genome Length
3864176 bp
Protein-coding Genes
3625 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nad(p)h-dependent oxidoreductase | CHN51_RS12820 | Not Available | + | 2646014 - 2646601 | 21693.1 |
| universal stress protein | CHN51_RS12825 | Not Available | + | 2646713 - 2647525 | 29282.0 |
| pas domain s-box protein | CHN51_RS12830 | Not Available | + | 2647642 - 2649165 | 55440.2 |
| response regulator transcription factor | CHN51_RS12835 | Not Available | + | 2649155 - 2649793 | 23424.5 |
| hypothetical protein | CHN51_RS12840 | Not Available | - | 2649796 - 2650029 | 8392.42 |
| cbb3-type cytochrome oxidase assembly protein ccos | CHN51_RS12845 | Not Available | - | 2650026 - 2650178 | 5544.73 |
| heavy metal translocating p-type atpase | CHN51_RS12850 | Not Available | - | 2650175 - 2652298 | 73821.0 |
| fixh family protein | CHN51_RS12855 | Not Available | - | 2652295 - 2652771 | 17545.0 |
| cytochrome c oxidase accessory protein ccog | CHN51_RS12860 | Not Available | - | 2652768 - 2654225 | 54482.7 |
| cytochrome-c oxidase, cbb3-type subunit iii | CHN51_RS12865 | Not Available | - | 2654212 - 2655147 | 33929.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.