Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus sp. YGSMI21 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus sp. YGSMI21
Accession NumberNZ_CP022548.1
Gene Summary
Adenine Count
806054 bp
Thymine Count
812740 bp
Guanine Count
1122214 bp
Cytosine Count
1123168 bp
Genome Length
3864176 bp
Protein-coding Genes
3625 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sensor domain-containing diguanylate cyclase | CHN51_RS12770 | Not Available | + | 2639329 - 2640309 | 36647.2 |
| class ii aldolase/adducin family protein | CHN51_RS12775 | Not Available | + | 2640481 - 2641323 | 31183.1 |
| duf6969 family protein | CHN51_RS12780 | Not Available | - | 2641339 - 2641890 | 21029.9 |
| hypothetical protein | CHN51_RS12785 | Not Available | - | 2641983 - 2642234 | 8164.1 |
| holin family protein | CHN51_RS12790 | Not Available | - | 2642407 - 2642820 | 15171.6 |
| glycoside hydrolase family 108 protein | CHN51_RS12795 | Not Available | - | 2642978 - 2643529 | 20267.2 |
| peroxiredoxin | CHN51_RS12800 | Not Available | + | 2643735 - 2644364 | 23466.7 |
| general stress protein | CHN51_RS12805 | Not Available | + | 2644376 - 2644927 | 19059.8 |
| hypothetical protein | CHN51_RS12810 | Not Available | + | 2644993 - 2645352 | 13543.9 |
| hypothetical protein | CHN51_RS12815 | Not Available | + | 2645382 - 2646017 | 23139.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.