Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus sp. YGSMI21 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus sp. YGSMI21
Accession NumberNZ_CP022548.1
Gene Summary
Adenine Count
806054 bp
Thymine Count
812740 bp
Guanine Count
1122214 bp
Cytosine Count
1123168 bp
Genome Length
3864176 bp
Protein-coding Genes
3625 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | CHN51_RS12640 | Not Available | + | 2607310 - 2609529 | 79602.1 |
| amp-binding protein | CHN51_RS12645 | Not Available | + | 2609911 - 2611761 | 66159.4 |
| alpha/beta fold hydrolase | CHN51_RS12650 | Not Available | + | 2612286 - 2613176 | 33560.1 |
| hypothetical protein | CHN51_RS19795 | Not Available | + | 2613208 - 2613369 | 5648.8 |
| mbl fold metallo-hydrolase | CHN51_RS12655 | Not Available | + | 2613523 - 2614383 | 30976.8 |
| fcd domain-containing protein | CHN51_RS12660 | Not Available | + | 2614654 - 2615421 | 28468.7 |
| aldehyde dehydrogenase | CHN51_RS12665 | Not Available | + | 2615897 - 2617294 | 48337.0 |
| helix-turn-helix transcriptional regulator | CHN51_RS12670 | Not Available | - | 2617474 - 2618592 | 41409.5 |
| sulfate adenylyltransferase subunit cysd | CHN51_RS12675 | Not Available | + | 2618658 - 2619572 | 34764.8 |
| sulfate adenylyltransferase subunit cysn | CHN51_RS12680 | Not Available | + | 2619572 - 2621497 | 70887.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.