Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus sp. YGSMI21 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus sp. YGSMI21
Accession NumberNZ_CP022548.1
Gene Summary
Adenine Count
806054 bp
Thymine Count
812740 bp
Guanine Count
1122214 bp
Cytosine Count
1123168 bp
Genome Length
3864176 bp
Protein-coding Genes
3625 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 3-dehydroquinate synthase | CHN51_RS12545 | Not Available | - | 2591232 - 2592332 | 38846.4 |
| shikimate kinase | CHN51_RS12550 | Not Available | - | 2592329 - 2592904 | 21027.2 |
| hypothetical protein | CHN51_RS20340 | Not Available | + | 2592998 - 2593132 | 4774.06 |
| hypothetical protein | CHN51_RS12555 | Not Available | + | 2593116 - 2594996 | 67004.6 |
| tyrosine recombinase | CHN51_RS12560 | Not Available | + | 2595036 - 2595932 | 33120.9 |
| acetyl-coa carboxylase carboxyltransferase subunit alpha | CHN51_RS12565 | Not Available | + | 2595964 - 2596911 | 34535.4 |
| m48 family metalloprotease | CHN51_RS12570 | Not Available | + | 2597023 - 2598522 | 52694.1 |
| flp family type ivb pilin | CHN51_RS12575 | Not Available | - | 2598633 - 2598797 | 5737.07 |
| flp family type ivb pilin | CHN51_RS12580 | Not Available | - | 2598911 - 2599084 | 6119.48 |
| (deoxy)nucleoside triphosphate pyrophosphohydrolase | CHN51_RS12585 | Not Available | + | 2599177 - 2599599 | 15450.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.