Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus sp. YGSMI21 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus sp. YGSMI21
Accession NumberNZ_CP022548.1
Gene Summary
Adenine Count
806054 bp
Thymine Count
812740 bp
Guanine Count
1122214 bp
Cytosine Count
1123168 bp
Genome Length
3864176 bp
Protein-coding Genes
3625 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | CHN51_RS12490 | Not Available | - | 2577917 - 2580328 | 88623.7 |
| cytochrome p450 | CHN51_RS12495 | Not Available | - | 2580386 - 2581615 | 46444.8 |
| marr family winged helix-turn-helix transcriptional regulator | CHN51_RS12500 | Not Available | + | 2581920 - 2582438 | 19336.6 |
| duf6445 family protein | CHN51_RS12505 | Not Available | + | 2582743 - 2583348 | 22417.2 |
| mbl fold metallo-hydrolase | CHN51_RS12510 | Not Available | + | 2583486 - 2584433 | 33505.9 |
| patatin-like protein | CHN51_RS12515 | Not Available | - | 2584434 - 2586785 | 87483.7 |
| dna repair protein rada | CHN51_RS12525 | Not Available | + | 2587105 - 2588469 | 48367.3 |
| cvpa family protein | CHN51_RS12530 | Not Available | + | 2588479 - 2589003 | 19011.6 |
| iron-sulfur cluster assembly scaffold protein | CHN51_RS12535 | Not Available | + | 2589000 - 2589440 | 15057.0 |
| monovalent cation:proton antiporter-2 (cpa2) family protein | CHN51_RS12540 | Not Available | + | 2589444 - 2591210 | 63256.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.