Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus sp. YGSMI21 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus sp. YGSMI21
Accession NumberNZ_CP022548.1
Gene Summary
Adenine Count
806054 bp
Thymine Count
812740 bp
Guanine Count
1122214 bp
Cytosine Count
1123168 bp
Genome Length
3864176 bp
Protein-coding Genes
3625 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| mate family efflux transporter | CHN51_RS12440 | Not Available | + | 2567786 - 2569192 | 50800.0 |
| hypothetical protein | CHN51_RS19790 | Not Available | - | 2569203 - 2570255 | 37646.1 |
| ompw/alkl family protein | CHN51_RS12450 | Not Available | + | 2570537 - 2571217 | 23969.6 |
| vgr related protein | CHN51_RS12455 | Not Available | - | 2571298 - 2571747 | 17458.0 |
| copper chaperone pcu(a)c | CHN51_RS12460 | Not Available | - | 2571757 - 2572209 | 15996.4 |
| molecular chaperone dnak | CHN51_RS12465 | Not Available | + | 2572403 - 2574346 | 69172.6 |
| molecular chaperone dnaj | CHN51_RS12470 | Not Available | + | 2574452 - 2575606 | 41196.1 |
| hypothetical protein | CHN51_RS12475 | Not Available | - | 2575732 - 2576136 | 15391.5 |
| helix-turn-helix transcriptional regulator | CHN51_RS12480 | Not Available | + | 2576414 - 2577130 | 26775.0 |
| nuclear transport factor 2 family protein | CHN51_RS12485 | Not Available | - | 2577484 - 2577879 | 14574.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.