Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus sp. YGSMI21 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus sp. YGSMI21
Accession NumberNZ_CP022548.1
Gene Summary
Adenine Count
806054 bp
Thymine Count
812740 bp
Guanine Count
1122214 bp
Cytosine Count
1123168 bp
Genome Length
3864176 bp
Protein-coding Genes
3625 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| long-chain-acyl-coa synthetase | CHN51_RS12340 | Not Available | - | 2549499 - 2551286 | 66013.3 |
| radical sam family heme chaperone hemw | CHN51_RS12345 | Not Available | - | 2551376 - 2552563 | 43280.4 |
| cap domain-containing protein | CHN51_RS12350 | Not Available | + | 2552558 - 2553193 | 23561.0 |
| rdgb/ham1 family non-canonical purine ntp pyrophosphatase | CHN51_RS12355 | Not Available | - | 2553289 - 2553915 | 22631.6 |
| ribonuclease ph | CHN51_RS12360 | Not Available | - | 2554185 - 2554898 | 25446.3 |
| heat-inducible transcriptional repressor hrca | CHN51_RS12365 | Not Available | + | 2555405 - 2556451 | 37283.8 |
| nucleotide exchange factor grpe | CHN51_RS12370 | Not Available | + | 2556475 - 2557074 | 21668.3 |
| is5 family transposase | CHN51_RS12375 | Not Available | - | 2557364 - 2558130 | 28480.3 |
| endonuclease domain-containing protein | CHN51_RS12380 | Not Available | + | 2558234 - 2558602 | 14347.0 |
| hypothetical protein | CHN51_RS12385 | Not Available | - | 2558718 - 2559260 | 20177.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.