Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus sp. YGSMI21 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus sp. YGSMI21
Accession NumberNZ_CP022548.1
Gene Summary
Adenine Count
806054 bp
Thymine Count
812740 bp
Guanine Count
1122214 bp
Cytosine Count
1123168 bp
Genome Length
3864176 bp
Protein-coding Genes
3625 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lysr substrate-binding domain-containing protein | CHN51_RS12095 | Not Available | - | 2492842 - 2493753 | 33796.9 |
| urca family protein | CHN51_RS12100 | Not Available | + | 2494061 - 2494390 | 11904.2 |
| hypothetical protein | CHN51_RS19775 | Not Available | - | 2494394 - 2494534 | 4929.02 |
| bluf domain-containing protein | CHN51_RS12105 | Not Available | + | 2494749 - 2495171 | 15765.7 |
| mbl fold metallo-hydrolase | CHN51_RS12110 | Not Available | - | 2495222 - 2496580 | 49566.6 |
| copper resistance protein b | CHN51_RS12115 | Not Available | - | 2496688 - 2497593 | 33116.9 |
| copper resistance system multicopper oxidase | CHN51_RS12120 | Not Available | - | 2497593 - 2499431 | 66620.2 |
| duf305 domain-containing protein | CHN51_RS12125 | Not Available | + | 2499604 - 2500116 | 19376.8 |
| maue/doxx family redox-associated membrane protein | CHN51_RS12130 | Not Available | + | 2500113 - 2500868 | 28125.5 |
| metal-sensitive transcriptional regulator | CHN51_RS12135 | Not Available | + | 2500882 - 2501157 | 10424.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.