Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus sp. YGSMI21 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus sp. YGSMI21
Accession NumberNZ_CP022548.1
Gene Summary
Adenine Count
806054 bp
Thymine Count
812740 bp
Guanine Count
1122214 bp
Cytosine Count
1123168 bp
Genome Length
3864176 bp
Protein-coding Genes
3625 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| deoxyguanosinetriphosphate triphosphohydrolase | CHN51_RS12045 | Not Available | + | 2481645 - 2482805 | 43684.6 |
| nad(p)h-binding protein | CHN51_RS12050 | Not Available | + | 2482929 - 2483588 | 23845.1 |
| glycine cleavage system aminomethyltransferase gcvt | CHN51_RS12055 | Not Available | + | 2484045 - 2485187 | 40946.0 |
| glycine cleavage system protein gcvh | CHN51_RS12060 | Not Available | + | 2485211 - 2485582 | 13532.3 |
| aminomethyl-transferring glycine dehydrogenase subunit gcvpa | CHN51_RS12065 | Not Available | + | 2485722 - 2487080 | 49019.1 |
| aminomethyl-transferring glycine dehydrogenase subunit gcvpb | CHN51_RS12070 | Not Available | + | 2487077 - 2488660 | 56706.6 |
| bile acid:sodium symporter family protein | CHN51_RS12075 | Not Available | + | 2488807 - 2489790 | 34806.9 |
| duf938 domain-containing protein | CHN51_RS12080 | Not Available | + | 2489787 - 2490428 | 23264.7 |
| long-chain-fatty-acid--coa ligase | CHN51_RS12085 | Not Available | + | 2490648 - 2492222 | 56682.6 |
| paai family thioesterase | CHN51_RS12090 | Not Available | + | 2492354 - 2492779 | 15665.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.