Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus sp. YGSMI21 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus sp. YGSMI21
Accession NumberNZ_CP022548.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3625 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phosphoribosylformylglycinamidine synthase subunit purq | CHN51_RS08855 | Not Available | - | 1808167 - 1808823 | 23428.7 |
| Phosphoribosylformylglycinamidine synthase, purs subunit | CHN51_RS08860 | Not Available | - | 1808823 - 1809077 | 9410.36 |
| transposase | CHN51_RS00005 | Not Available | - | 63 - 850 | 29485.3 |
| transposase | CHN51_RS00010 | Not Available | - | 928 - 1182 | 9189.0 |
| transcriptional regulator domain-containing protein | CHN51_RS00020 | Not Available | - | 1747 - 2109 | 14066.4 |
| transposase | CHN51_RS00025 | Not Available | - | 2263 - 2513 | 9171.82 |
| helix-turn-helix domain-containing protein | CHN51_RS20050 | Not Available | + | 2528 - 2947 | 16198.9 |
| duf736 domain-containing protein | CHN51_RS00035 | Not Available | - | 2999 - 3322 | 11793.6 |
| type ii toxin-antitoxin system yhav family toxin | CHN51_RS00045 | Not Available | - | 3948 - 4403 | 17279.6 |
| type ii toxin-antitoxin system prlf family antitoxin | CHN51_RS00050 | Not Available | - | 4425 - 4748 | 11271.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.