Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus sp. YGSMI21 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus sp. YGSMI21
Accession NumberNZ_CP022548.1
Gene Summary
Adenine Count
806054 bp
Thymine Count
812740 bp
Guanine Count
1122214 bp
Cytosine Count
1123168 bp
Genome Length
3864176 bp
Protein-coding Genes
3625 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cysteine synthase a | CHN51_RS11945 | Not Available | + | 2458748 - 2459743 | 35111.7 |
| hypothetical protein | CHN51_RS11950 | Not Available | + | 2459736 - 2460098 | 12827.4 |
| gldg family protein | CHN51_RS11955 | Not Available | + | 2460099 - 2460890 | 27895.2 |
| division/cell wall cluster transcriptional repressor mraz | CHN51_RS11960 | Not Available | + | 2461162 - 2461665 | 18297.6 |
| 16s rrna (cytosine(1402)-n(4))-methyltransferase rsmh | CHN51_RS11965 | Not Available | + | 2461662 - 2462609 | 34020.3 |
| hypothetical protein | CHN51_RS11970 | Not Available | + | 2462606 - 2463208 | 21679.2 |
| peptidoglycan d,d-transpeptidase ftsi family protein | CHN51_RS11975 | Not Available | + | 2463205 - 2464923 | 62557.7 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | CHN51_RS11980 | Not Available | + | 2464910 - 2466352 | 51282.9 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | CHN51_RS11985 | Not Available | + | 2466349 - 2467746 | 48072.4 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | CHN51_RS11990 | Not Available | + | 2467746 - 2468816 | 38867.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.